API reference for alphastats

All important features of alphastats are documented.

Contents

• File Loader
  • AlphaPeptLoader
    • AlphaPeptLoader
  • DIANNLoader
    • DIANNLoader
  • FragPipeLoader
    • FragPipeLoader
  • MaxQuantLoader
    • MaxQuantLoader
  • SpectronautLoader
    • SpectronautLoader
  • mzTabLoader
    • mzTabLoader
• DataSet
  • DataSet
    • DataSet
      • DataSet.ancova()
      • DataSet.anova()
      • DataSet.batch_correction()
      • DataSet.create_matrix()
      • DataSet.diff_expression_analysis()
      • DataSet.go_abundance_correction()
      • DataSet.go_characterize_foreground()
      • DataSet.go_compare_samples()
      • DataSet.go_genome()
      • DataSet.load_metadata()
      • DataSet.overview()
      • DataSet.plot_clustermap()
      • DataSet.plot_correlation_matrix()
      • DataSet.plot_dendrogram()
      • DataSet.plot_imputed_values()
      • DataSet.plot_intensity()
      • DataSet.plot_pca()
      • DataSet.plot_sampledistribution()
      • DataSet.plot_samplehistograms()
      • DataSet.plot_tsne()
      • DataSet.plot_umap()
      • DataSet.plot_volcano()
      • DataSet.preprocess()
      • DataSet.preprocess_print_info()
      • DataSet.reset_preprocessing()
      • DataSet.tukey_test()